Yu-Gi-Oh!: Bonds Beyond Time.The story takes place sometime during the beginning of the fourth season of Yu-Gi-Oh! 5D's, right before the events of the World Racing Grand Prix (WRGP) took place. As Yusei Fudo ponders the current state of New Domino City, Jack Atlas and Crow Hogan come to cheer him up, with the idea of going for a ride on their Duel Runners. As they are riding, a mysterious Turbo Duelist called Paradox appears and challenges Yusei to a duel. However, when Yusei summons his Stardust Dragon, Paradox seals it inside a card and disappears with it. Yusei and his friends soon learn through computer research that Paradox has appeared during the era of Yugi Muto, using Stardust Dragon to cause a huge incident in the past, the effects of which cause New Domino City to start disappearing as time is altered. With the Signer's marks suddenly reacting, the Crimson Dragon appears, giving Yusei's Duel Runner the ability to travel through time.

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